/* AmplitudeTier.c
 *
 * Copyright (C) 2003-2008 Paul Boersma
 *
 * This program is free software; you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
 * the Free Software Foundation; either version 2 of the License, or (at
 * your option) any later version.
 *
 * This program is distributed in the hope that it will be useful, but
 * WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
 * See the GNU General Public License for more details.
 *
 * You should have received a copy of the GNU General Public License
 * along with this program; if not, write to the Free Software
 * Foundation, Inc., 675 Mass Ave, Cambridge, MA 02139, USA.
 */

/*
 * pb 2003/06/10
 * pb 2004/07/14 maximum amplitude factor
 * pb 2006/12/30 new Sound_create API
 * pb 2007/01/27 compatible with stereo Sounds
 * pb 2007/03/17 domain quantity
 * pb 2007/08/12 wchar_t
 * pb 2008/01/19 double
 * pb 2010/10/19 allow drawing without speckles
 */

#include "AmplitudeTier.h"

class_methods (AmplitudeTier, RealTier)
	us -> domainQuantity = MelderQuantity_TIME_SECONDS;
class_methods_end

AmplitudeTier AmplitudeTier_create (double tmin, double tmax) {
	AmplitudeTier me = Thing_new (AmplitudeTier); cherror
	RealTier_init_e (me, tmin, tmax); cherror
end:
	iferror forget (me);
	return me;
}

void AmplitudeTier_draw (AmplitudeTier me, Graphics g, double tmin, double tmax,
	double ymin, double ymax, const wchar_t *method, int garnish)
{
	RealTier_draw (me, g, tmin, tmax, ymin, ymax, garnish, method, L"Sound pressure (Pa)");
}

AmplitudeTier PointProcess_upto_AmplitudeTier (PointProcess me, double soundPressure) {
	AmplitudeTier thee = (AmplitudeTier) PointProcess_upto_RealTier (me, soundPressure);
	if (! thee) return NULL;
	Thing_overrideClass (thee, classAmplitudeTier);
	return thee;
}

AmplitudeTier IntensityTier_to_AmplitudeTier (IntensityTier me) {
	long i;
	AmplitudeTier thee = (AmplitudeTier) Data_copy (me);
	if (! thee) return NULL;
	Thing_overrideClass (thee, classAmplitudeTier);
	for (i = 1; i <= thy points -> size; i ++) {
		RealPoint point = thy points -> item [i];
		point -> value = pow (10.0, point -> value / 20.0) * 2.0e-5;
	}
	return thee;
}

IntensityTier AmplitudeTier_to_IntensityTier (AmplitudeTier me, double threshold_dB) {
	double threshold_Pa = pow (10.0, threshold_dB / 20.0) * 2.0e-5;   /* Often zero! */
	long i;
	IntensityTier thee = (IntensityTier) Data_copy (me);
	if (! thee) return NULL;
	Thing_overrideClass (thee, classIntensityTier);
	for (i = 1; i <= thy points -> size; i ++) {
		RealPoint point = thy points -> item [i];
		double absoluteValue = fabs (point -> value);
		point -> value = absoluteValue <= threshold_Pa ? threshold_dB : 20.0 * log10 (absoluteValue / 2.0e-5);
	}
	return thee;
}

TableOfReal AmplitudeTier_downto_TableOfReal (AmplitudeTier me) {
	return RealTier_downto_TableOfReal (me, L"Time (s)", L"Sound pressure (Pa)");
}

void Sound_AmplitudeTier_multiply_inline (Sound me, AmplitudeTier amplitude) {
	if (amplitude -> points -> size == 0) return;
	for (long isamp = 1; isamp <= my nx; isamp ++) {
		double t = my x1 + (isamp - 1) * my dx;
		double factor = RealTier_getValueAtTime (amplitude, t);
		for (long channel = 1; channel <= my ny; channel ++) {
			my z [channel] [isamp] *= factor;
		}
	}
}

Sound Sound_AmplitudeTier_multiply (Sound me, AmplitudeTier amplitude) {
	Sound thee = Data_copy (me);
	if (! thee) return NULL;
	Sound_AmplitudeTier_multiply_inline (thee, amplitude);
	Vector_scale (thee, 0.9);
	return thee;
}

AmplitudeTier PointProcess_Sound_to_AmplitudeTier_point (PointProcess me, Sound thee) {
	AmplitudeTier him = NULL;
	long i, imin, imax, numberOfPeaks = PointProcess_getWindowPoints (me, my xmin, my xmax, & imin, & imax);
	if (numberOfPeaks < 3) return NULL;
	him = AmplitudeTier_create (my xmin, my xmax);
	for (i = imin; i <= imax; i ++) {
		double value = Vector_getValueAtX (thee, my t [i], Vector_CHANNEL_AVERAGE, Vector_VALUE_INTERPOLATION_SINC700);
		if (NUMdefined (value)) RealTier_addPoint (him, my t [i], value);
	}
	return him;
}
/*
static double Sound_getPeak (Sound me, double tmin, double tmax, long channel) {
	double minimum, timeOfMinimum, maximum, timeOfMaximum;
	double *y = my z [channel];
	long i, imin, imax, sampleOfMinimum, sampleOfMaximum;
	if (Sampled_getWindowSamples (me, tmin, tmax, & imin, & imax) < 3) return NUMundefined;
	maximum = minimum = y [imin];
	sampleOfMaximum = sampleOfMinimum = imin;
	for (i = imin + 1; i <= imax; i ++) {
		if (y [i] < minimum) { minimum = y [i]; sampleOfMinimum = i; }
		if (y [i] > maximum) { maximum = y [i]; sampleOfMaximum = i; }
	}
	timeOfMinimum = my x1 + (sampleOfMinimum - 1) * my dx;
	timeOfMaximum = my x1 + (sampleOfMaximum - 1) * my dx;
	Vector_getMinimumAndX (me, timeOfMinimum - my dx, timeOfMinimum + my dx, NUM_PEAK_INTERPOLATE_SINC70, & minimum, & timeOfMinimum);
	Vector_getMaximumAndX (me, timeOfMaximum - my dx, timeOfMaximum + my dx, NUM_PEAK_INTERPOLATE_SINC70, & maximum, & timeOfMaximum);
	return maximum - minimum;
}
*/
static double Sound_getHannWindowedRms (Sound me, double tmid, double widthLeft, double widthRight) {
	double sumOfSquares = 0.0, windowSumOfSquares = 0.0;
	long i, imin, imax;
	if (Sampled_getWindowSamples (me, tmid - widthLeft, tmid + widthRight, & imin, & imax) < 3) return NUMundefined;
	for (i = imin; i <= imax; i ++) {
		double t = my x1 + (i - 1) * my dx;
		double width = t < tmid ? widthLeft : widthRight;
		double windowPhase = (t - tmid) / width;   /* in [-1 .. 1] */
		double window = 0.5 + 0.5 * cos (NUMpi * windowPhase);   /* Hann */
		double windowedValue = ( my ny == 1 ? my z [1] [i] : 0.5 * (my z [1] [i] + my z [2] [i]) ) * window;
		sumOfSquares += windowedValue * windowedValue;
		windowSumOfSquares += window * window;
	}
	return sqrt (sumOfSquares / windowSumOfSquares);
}
AmplitudeTier PointProcess_Sound_to_AmplitudeTier_period (PointProcess me, Sound thee, double tmin, double tmax,
	double pmin, double pmax, double maximumPeriodFactor)
{
	AmplitudeTier him = NULL;
	long i, imin, imax, numberOfPeaks;
	if (tmax <= tmin) tmin = my xmin, tmax = my xmax;
	numberOfPeaks = PointProcess_getWindowPoints (me, tmin, tmax, & imin, & imax);
	if (numberOfPeaks < 3) return NULL;
	him = AmplitudeTier_create (tmin, tmax);
	for (i = imin + 1; i < imax; i ++) {
		double p1 = my t [i] - my t [i - 1], p2 = my t [i + 1] - my t [i];
		double intervalFactor = p1 > p2 ? p1 / p2 : p2 / p1;
		if (pmin == pmax || (p1 >= pmin && p1 <= pmax && p2 >= pmin && p2 <= pmax && intervalFactor <= maximumPeriodFactor)) {
			double peak = Sound_getHannWindowedRms (thee, my t [i], 0.2 * p1, 0.2 * p2);
			if (NUMdefined (peak) && peak > 0.0) RealTier_addPoint (him, my t [i], peak);
		}
	}
	return him;
}
double AmplitudeTier_getShimmer_local (AmplitudeTier me, double pmin, double pmax, double maximumAmplitudeFactor) {
	long i, numberOfPeaks = 0;
	double numerator = 0.0, denominator = 0.0;
	RealPoint *points = (RealPoint *) my points -> item;
	for (i = 2; i <= my points -> size; i ++) {
		double p = points [i] -> time - points [i - 1] -> time;
		if (pmin == pmax || (p >= pmin && p <= pmax)) {
			double a1 = points [i - 1] -> value, a2 = points [i] -> value;
			double amplitudeFactor = a1 > a2 ? a1 / a2 : a2 / a1;
			if (amplitudeFactor <= maximumAmplitudeFactor) {
				numerator += fabs (a1 - a2);
				numberOfPeaks ++;
			}
		}
	}
	if (numberOfPeaks < 1) return NUMundefined;
	numerator /= numberOfPeaks;
	numberOfPeaks = 0;
	for (i = 1; i < my points -> size; i ++) {
		denominator += points [i] -> value;
		numberOfPeaks ++;
	}
	denominator /= numberOfPeaks;
	if (denominator == 0.0) return NUMundefined;
	return numerator / denominator;
}
double AmplitudeTier_getShimmer_local_dB (AmplitudeTier me, double pmin, double pmax, double maximumAmplitudeFactor) {
	long i, numberOfPeaks = 0;
	double result = 0.0;
	RealPoint *points = (RealPoint *) my points -> item;
	for (i = 2; i <= my points -> size; i ++) {
		double p = points [i] -> time - points [i - 1] -> time;
		if (pmin == pmax || (p >= pmin && p <= pmax)) {
			double a1 = points [i - 1] -> value, a2 = points [i] -> value;
			double amplitudeFactor = a1 > a2 ? a1 / a2 : a2 / a1;
			if (amplitudeFactor <= maximumAmplitudeFactor) {
				result += fabs (log10 (a1 / a2));
				numberOfPeaks ++;
			}
		}
	}
	if (numberOfPeaks < 1) return NUMundefined;
	result /= numberOfPeaks;
	return 20.0 * result;
}
double AmplitudeTier_getShimmer_apq3 (AmplitudeTier me, double pmin, double pmax, double maximumAmplitudeFactor) {
	long i, numberOfPeaks = 0;
	double numerator = 0.0, denominator = 0.0;
	RealPoint *points = (RealPoint *) my points -> item;
	for (i = 2; i <= my points -> size - 1; i ++) {
		double
			p1 = points [i] -> time - points [i - 1] -> time,
			p2 = points [i + 1] -> time - points [i] -> time;
		if (pmin == pmax || (p1 >= pmin && p1 <= pmax && p2 >= pmin && p2 <= pmax)) {
			double a1 = points [i - 1] -> value, a2 = points [i] -> value, a3 = points [i + 1] -> value;
			double f1 = a1 > a2 ? a1 / a2 : a2 / a1, f2 = a2 > a3 ? a2 / a3 : a3 / a2;
			if (f1 <= maximumAmplitudeFactor && f2 <= maximumAmplitudeFactor) {
				double threePointAverage = (a1 + a2 + a3) / 3.0;
				numerator += fabs (a2 - threePointAverage);
				numberOfPeaks ++;
			}
		}
	}
	if (numberOfPeaks < 1) return NUMundefined;
	numerator /= numberOfPeaks;
	numberOfPeaks = 0;
	for (i = 1; i < my points -> size; i ++) {
		denominator += points [i] -> value;
		numberOfPeaks ++;
	}
	denominator /= numberOfPeaks;
	if (denominator == 0.0) return NUMundefined;
	return numerator / denominator;
}
double AmplitudeTier_getShimmer_apq5 (AmplitudeTier me, double pmin, double pmax, double maximumAmplitudeFactor) {
	long i, numberOfPeaks = 0;
	double numerator = 0.0, denominator = 0.0;
	RealPoint *points = (RealPoint *) my points -> item;
	for (i = 3; i <= my points -> size - 2; i ++) {
		double
			p1 = points [i - 1] -> time - points [i - 2] -> time,
			p2 = points [i] -> time - points [i - 1] -> time,
			p3 = points [i + 1] -> time - points [i] -> time,
			p4 = points [i + 2] -> time - points [i + 1] -> time;
		if (pmin == pmax || (p1 >= pmin && p1 <= pmax && p2 >= pmin && p2 <= pmax
			&& p3 >= pmin && p3 <= pmax && p4 >= pmin && p4 <= pmax))
		{
			double a1 = points [i - 2] -> value, a2 = points [i - 1] -> value, a3 = points [i] -> value,
				a4 = points [i + 1] -> value, a5 = points [i + 2] -> value;
			double f1 = a1 > a2 ? a1 / a2 : a2 / a1, f2 = a2 > a3 ? a2 / a3 : a3 / a2,
				f3 = a3 > a4 ? a3 / a4 : a4 / a3, f4 = a4 > a5 ? a4 / a5 : a5 / a4;
			if (f1 <= maximumAmplitudeFactor && f2 <= maximumAmplitudeFactor &&
			    f3 <= maximumAmplitudeFactor && f4 <= maximumAmplitudeFactor)
			{
				double fivePointAverage = (a1 + a2 + a3 + a4 + a5) / 5.0;
				numerator += fabs (a3 - fivePointAverage);
				numberOfPeaks ++;
			}
		}
	}
	if (numberOfPeaks < 1) return NUMundefined;
	numerator /= numberOfPeaks;
	numberOfPeaks = 0;
	for (i = 1; i < my points -> size; i ++) {
		denominator += points [i] -> value;
		numberOfPeaks ++;
	}
	denominator /= numberOfPeaks;
	if (denominator == 0.0) return NUMundefined;
	return numerator / denominator;
}
double AmplitudeTier_getShimmer_apq11 (AmplitudeTier me, double pmin, double pmax, double maximumAmplitudeFactor) {
	long i, numberOfPeaks = 0;
	double numerator = 0.0, denominator = 0.0;
	RealPoint *points = (RealPoint *) my points -> item;
	for (i = 6; i <= my points -> size - 5; i ++) {
		double
			p1 = points [i - 4] -> time - points [i - 5] -> time,
			p2 = points [i - 3] -> time - points [i - 4] -> time,
			p3 = points [i - 2] -> time - points [i - 3] -> time,
			p4 = points [i - 1] -> time - points [i - 2] -> time,
			p5 = points [i] -> time - points [i - 1] -> time,
			p6 = points [i + 1] -> time - points [i] -> time,
			p7 = points [i + 2] -> time - points [i + 1] -> time,
			p8 = points [i + 3] -> time - points [i + 2] -> time,
			p9 = points [i + 4] -> time - points [i + 3] -> time,
			p10 = points [i + 5] -> time - points [i + 4] -> time;
		if (pmin == pmax || (p1 >= pmin && p1 <= pmax && p2 >= pmin && p2 <= pmax
			&& p3 >= pmin && p3 <= pmax && p4 >= pmin && p4 <= pmax && p5 >= pmin && p5 <= pmax
			&& p6 >= pmin && p6 <= pmax && p7 >= pmin && p7 <= pmax && p8 >= pmin && p8 <= pmax
			&& p9 >= pmin && p9 <= pmax && p10 >= pmin && p10 <= pmax))
		{
			double a1 = points [i - 5] -> value, a2 = points [i - 4] -> value, a3 = points [i - 3] -> value,
				a4 = points [i - 2] -> value, a5 = points [i - 1] -> value, a6 = points [i] -> value,
				a7 = points [i + 1] -> value, a8 = points [i + 2] -> value, a9 = points [i + 3] -> value,
				a10 = points [i + 4] -> value, a11 = points [i + 5] -> value;
			double f1 = a1 > a2 ? a1 / a2 : a2 / a1, f2 = a2 > a3 ? a2 / a3 : a3 / a2,
				f3 = a3 > a4 ? a3 / a4 : a4 / a3, f4 = a4 > a5 ? a4 / a5 : a5 / a4,
				f5 = a5 > a6 ? a5 / a6 : a6 / a5, f6 = a6 > a7 ? a6 / a7 : a7 / a6,
				f7 = a7 > a8 ? a7 / a8 : a8 / a7, f8 = a8 > a9 ? a8 / a9 : a9 / a8,
				f9 = a9 > a10 ? a9 / a10 : a10 / a9, f10 = a10 > a11 ? a10 / a11 : a11 / a10;
			if (f1 <= maximumAmplitudeFactor && f2 <= maximumAmplitudeFactor &&
			    f3 <= maximumAmplitudeFactor && f4 <= maximumAmplitudeFactor &&
			    f5 <= maximumAmplitudeFactor && f6 <= maximumAmplitudeFactor &&
			    f7 <= maximumAmplitudeFactor && f8 <= maximumAmplitudeFactor &&
			    f9 <= maximumAmplitudeFactor && f10 <= maximumAmplitudeFactor)
			{
				double elevenPointAverage = (a1 + a2 + a3 + a4 + a5 + a6 + a7 + a8 + a9 + a10 + a11) / 11.0;
				numerator += fabs (a6 - elevenPointAverage);
				numberOfPeaks ++;
			}
		}
	}
	if (numberOfPeaks < 1) return NUMundefined;
	numerator /= numberOfPeaks;
	numberOfPeaks = 0;
	for (i = 1; i < my points -> size; i ++) {
		denominator += points [i] -> value;
		numberOfPeaks ++;
	}
	denominator /= numberOfPeaks;
	if (denominator == 0.0) return NUMundefined;
	return numerator / denominator;
}
double AmplitudeTier_getShimmer_dda (AmplitudeTier me, double pmin, double pmax, double maximumAmplitudeFactor) {
	double apq3 = AmplitudeTier_getShimmer_apq3 (me, pmin, pmax, maximumAmplitudeFactor);
	return NUMdefined (apq3) ? 3.0 * apq3 : NUMundefined;
}

Sound AmplitudeTier_to_Sound (AmplitudeTier me, double samplingFrequency, long interpolationDepth) {
	Sound thee;
	long it;
	long sound_nt = 1 + floor ((my xmax - my xmin) * samplingFrequency);   /* >= 1 */
	double dt = 1.0 / samplingFrequency;
	double tmid = (my xmin + my xmax) / 2;
	double t1 = tmid - 0.5 * (sound_nt - 1) * dt;
	double *sound;
	thee = Sound_create (1, my xmin, my xmax, sound_nt, dt, t1);
	if (! thee) return NULL;
	sound = thy z [1];
	for (it = 1; it <= my points -> size; it ++) {
		RealPoint point = my points -> item [it];
		double t = point -> time, amplitude = point -> value, angle, halfampsinangle;
		long mid = Sampled_xToNearestIndex (thee, t), j;
		long begin = mid - interpolationDepth, end = mid + interpolationDepth;
		if (begin < 1) begin = 1;
		if (end > thy nx) end = thy nx;
		angle = NUMpi * (Sampled_indexToX (thee, begin) - t) / thy dx;
		halfampsinangle = 0.5 * amplitude * sin (angle);
		for (j = begin; j <= end; j ++) {
			if (fabs (angle) < 1e-6)
				sound [j] += amplitude;
			else if (angle < 0.0)
				sound [j] += halfampsinangle *
					(1 + cos (angle / (mid - begin + 1))) / angle;
			else
				sound [j] += halfampsinangle *
					(1 + cos (angle / (end - mid + 1))) / angle;
			angle += NUMpi;
			halfampsinangle = - halfampsinangle;
		}
	}
	return thee;
}

/* End of file AmplitudeTier.c */
